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1.
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41 p, 3.3 MB |
Beyond the rand flora pattern : Phylogeny and biogeographical history of Volutaria (compositae)
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Calleja, Juan Antonio (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Garcia-Jacas, Núria (Institut Botànic de Barcelona) ;
Roquet, Cristina (Université Grenoble Alpes) ;
Susanna, Alfonso (Institut Botànic de Barcelona) ;
Universitat Autònoma de Barcelona.
Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia
The Rand Flora describes the disjunct phytogeographical pattern of a wide range of taxa distributed at the periphery of Africa and adjacent islands, as well as the Arabian Peninsula. We focused on Volutaria (Compositae: Cardueae: Centaurineae), a genus of ca. [...]
2016 -  10.12705/652.8
Taxon, Vol. 65, Issue 2 (May 2016) , p. 315-332
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2.
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60 p, 9.3 MB |
Nuclear and plastid DNA phylogeny of tribe Cardueae (Compositae) with Hyb-Seq data : A new subtribal classification and a temporal diversification framework
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Herrando-Moraira, Sonia (Institut Botànic de Barcelona) ;
Calleja, Juan Antonio (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Galbany-Casals, Mercè (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Garcia-Jacas, Núria (Institut Botànic de Barcelona) ;
Liu, Jian-Quan (Key Sichuan University) ;
López-Alvarado, Javier (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
López-Pujol, Jordi (Institut Botànic de Barcelona) ;
Mandel, Jennifer R. (University of Memphis. Department of Biological Sciences) ;
Massó, Sergi (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Montes-Moreno, Noemí (Institut Botànic de Barcelona) ;
Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Sáez, Llorenç (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Sennikov, Alexander N. (Finnish Museum of Natural History) ;
Susanna, Alfonso (Institut Botànic de Barcelona) ;
Vilatersana, Roser (Institut Botànic de Barcelona)
Classification of tribe Cardueae in natural subtribes has always been a challenge due to the lack of support of some critical branches in previous phylogenies based on traditional Sanger markers. With the aim to propose a new subtribal delimitation, we applied a Hyb-Seq approach to a set of 76 Cardueae species representing all subtribes and informal groups defined in the tribe, targeting 1061 nuclear conserved orthology loci (COS) designed for Compositae and obtaining chloroplast coding regions as by-product of off-target reads. [...]
2019 - 10.1016/j.ympev.2019.05.001
Molecular Phylogenetics and Evolution, Vol. 137 (August 2019) , p. 313-332
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3.
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17 p, 12.5 MB |
Impact of the climatic changes in the Pliocene-Pleistocene transition on Irano-Turanian species. The radiation of genus Jurinea (Compositae)
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Herrando-Moraira, Sonia (Institut Botànic de Barcelona) ;
Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Calleja, Juan Antonio (Research Centre on Biodiversity and Global Change. Departament of Biology) ;
Chen, You-Sheng (Chinese Academy of Sciences) ;
Fujikawa, Kazumi (Kochi Prefectural Makino Botanical Garden) ;
Galbany-Casals, Mercè (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Garcia-Jacas, Núria (Institut Botànic de Barcelona) ;
Liu, Jian-Quan (Key Sichuan University) ;
López-Alvarado, Javier (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
López-Pujol, Jordi (Universidad Espíritu Santo . Escuela de Ciencias Ambientales) ;
Mandel, Jennifer R. (University of Memphis. Department of Biological Sciences) ;
Mehregan, Iraj (Islamic Azad University. Department of Biology) ;
Sáez, Llorenç (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Sennikov, Alexander N. (Finnish Museum of Natural History) ;
Susanna, Alfonso (Institut Botànic de Barcelona) ;
Vilatersana, Roser (Institut Botànic de Barcelona) ;
Xu, Lian-Sheng (Chinese Academy of Sciences)
The Irano-Turanian region is one of the world's richest floristic regions and the centre of diversity for numerous xerophytic plant lineages. However, we still have limited knowledge on the timing of evolution and biogeographic history of its flora, and potential drivers of diversification remain underexplored. [...]
2023 - 10.1016/j.ympev.2023.107928
Molecular Phylogenetics and Evolution, Vol. 189 (December 2023) , art. 107928
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4.
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22 p, 4.6 MB |
African Mountain Thistles : Three New Genera in the Carduus-Cirsium Group
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Moreyra, Lucía D. (Institut Botànic de Barcelona) ;
Garcia-Jacas, Núria (Institut Botànic de Barcelona) ;
Roquet, Cristina (Universitat Autònoma de Barcelona) ;
Ackerfield, Jennifer R. (Colorado State University. Department of Biology) ;
Arabacı, Turan (Inönü University. Department of Pharmaceutical Botany) ;
Blanco-Gavaldà, Carme (Universitat Autònoma de Barcelona) ;
Brochmann, Christian (University of Oslo. Natural History Museum) ;
Calleja, Juan Antonio (Universidad Autónoma de Madrid. Centro de Investigación en Biodiversidad y Cambio Global) ;
Dirmenci, Tuncay (Balıkesir University. Department of Biology) ;
Fujikawa, Kazumi (Kochi Prefectural Makino Botanical Garden) ;
Galbany-Casals, Mercè (Universitat Autònoma de Barcelona) ;
Gao, Tiangang (Chinese Academy of Sciences. State Key Laboratory of Systematic and Evolutionary Botany) ;
Gizaw, Abel (Addis Ababa University. Department of Plant Biology and Biodiversity Management) ;
López-Alvarado, Javier (Universitat Autònoma de Barcelona) ;
Mehregan, Iraj (Islamic Azad University. Department of Biology, Science and Research Branch) ;
Vilatersana, Roser (Institut Botànic de Barcelona) ;
Yıldız, Bayram (Ismail Cem Street) ;
Leliaert, Frederik (Meise Botanic Garden) ;
Seregin, Alexey P. (M. V. Lomonosov Moscow State University) ;
Susanna, Alfonso (Institut Botànic de Barcelona)
The floras on the highest mountains in tropical eastern Africa are among the most unique floras in the world. Despite the exceptionally high concentration of endemic species, these floras remain understudied from an evolutionary point of view. [...]
2023 - 10.3390/plants12173083
Plants, Vol. 12, Issue 17 (August 2023) , art. 3083
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5.
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24 p, 2.9 MB |
Repeatedly Northwards and Upwards : Southern African Grasslands Fuel the Colonization of the African Sky Islands in Helichrysum (Compositae)
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Blanco-Gavaldà, Carme (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Galbany-Casals, Mercè (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Susanna, Alfonso (Institut Botànic de Barcelona) ;
Andrés-Sánchez, Santiago (University of Salamanca. Department of Botany and Plant Physiology and Plant DNA Biobank) ;
Bayer, Randall J. (University of Memphis. Department of Biological Sciences, Center for Biodiversity) ;
Brochmann, Christian (University of Oslo. Natural History Museum) ;
Cron, Glynis V. (University of the Witwatersrand. School of Animal, Plant and Environmental Sciences) ;
Bergh, Nicola G. (South African National Biodiversity Institute) ;
Garcia-Jacas, Núria (Institut Botànic de Barcelona) ;
Gizaw, Abel (Addis Ababa University. Department of Plant Biology and Biodiversity Management) ;
Kandziora, Martha (Charles University in Prague. Department of Botany) ;
Kolář, Filip (Academy of Sciences of the Czech Republic) ;
López-Alvarado, Javier (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Leliaert, Frederik (Meise Botanic Garden) ;
Letsara, Rokiman (Herbarium of the Parc Botanique et Zoologique of Tsimbazaza) ;
Moreyra, Lucía D. (Institut Botànic de Barcelona) ;
Razafimandimbison, Sylvain G. (Swedish Museum of Natural History. Department of Botany) ;
Schmickl, Roswitha (Institute of Botany, Academy of Sciences of the Czech Republic) ;
Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia)
The Afromontane and Afroalpine areas constitute some of the main biodiversity hotspots of Africa. They are particularly rich in plant endemics, but the biogeographic origins and evolutionary processes leading to this outstanding diversity are poorly understood. [...]
2023 - 10.3390/plants12112213
Plants, Vol. 12, Issue 11 (June 2023) , art. 2213
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6.
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13 p, 17.1 MB |
Tempo and drivers of plant diversification in the European mountain system
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Smyčka, Jan (Charles University. Department of Botany) ;
Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Boleda, Martí (Université Grenoble Alpes) ;
Alberti, Adriana (Université Paris-Saclay. Institute for Integrative Biology of the Cell) ;
Boyer, Frédéric (Université Grenoble Alpes) ;
Douzet, Rolland (Université Grenoble Alpes) ;
Perrier, Christophe (Université Grenoble Alpes) ;
Rome, Maxime (Université Grenoble Alpes) ;
Valay, Jean-Gabriel (Université Grenoble Alpes) ;
Denoeud, France (Université Paris-Saclay) ;
Šemberová, Kristýna (Czech Academy of Sciences. Institute of Botany) ;
Zimmermann, Niklaus E. (Swiss Federal Research Institute WSL) ;
Thuiller, Wilfried (Université Grenoble Alpes) ;
Wincker, Patrick (Université Evry) ;
Alsos, Inger Greve (The Arctic University of Norway) ;
Coissac, Eric (Université Grenoble Alpes) ;
Lavergne, Sébastien (Université Grenoble Alpes)
There is still limited consensus on the evolutionary history of species-rich temperate alpine floras due to a lack of comparable and high-quality phylogenetic data covering multiple plant lineages. Here we reconstructed when and how European alpine plant lineages diversified, i. [...]
2022 - 10.1038/s41467-022-30394-5
Nature communications, Vol. 13 (May 2022) , art. 2750
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7.
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10 p, 2.7 MB |
Discovery of cryptic plant diversity on the rooftops of the Alps
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Boucher, Florian C. (Université Grenoble Alpes) ;
Dentant, Cédric (Université Grenoble Alpes) ;
Ibanez, Sébastien (Université Grenoble Alpes) ;
Capblancq, Thibaut (University of Vermont. Department of Plant Biology) ;
Boleda, Martí (Université Grenoble Alpes) ;
Boulangeat, Louise (Université Grenoble Alpes) ;
Smyčka, Jan (Charles University and the Academy of Sciences of the Czech Republic) ;
Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Lavergne, Sébastien (Université Grenoble Alpes)
High elevation temperate mountains have long been considered species poor owing to high extinction or low speciation rates during the Pleistocene. We performed a phylogenetic and population genomic investigation of an emblematic high-elevation plant clade (Androsace sect. [...]
2021 - 10.1038/s41598-021-90612-w
Scientific reports, Vol. 11 (May 2021) , art. 11128
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8.
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7 p, 1.4 MB |
The Earth BioGenome Project 2020: Starting the clock
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Lewin, Harris A. (University of California Davis. Department of Evolution and Ecology (USA)) ;
Richards, Stephen (University of California Davis. Genome Center) ;
Aiden, Erez (Baylor College of Medicine) ;
Allende, Miguel L. (Universidad de Chile. Center for Genome Regulation) ;
Archibald, John M. (Dalhousie University. Department of Biochemistry & Molecular Biology) ;
Bálint, Miklós M. (Senckenberg Leibniz Institution for Biodiversity and Earth System Research. LOEWE Centre of Translational Biodiversity Genomics) ;
Barker, Katharine M. (Smithsonian Institution. National Museum of Natural History) ;
Baumgartnerk, Bridget (Revive & Restore (USA)) ;
Belov, Katherine (University of Sydney. School of Life and Environmental Sciences) ;
Bertorelle, Giorgio (University of Ferrara. Department of Life Sciences and Biotechnology) ;
Blaxter, Mark (Wellcome Sanger Institute (Cambridge)) ;
Cai, Jing (Northwestern Polytechnical University. School of Ecology and Environment (China)) ;
Caperello, Nicolette (University of California Davis. Genome Center) ;
Carlson, Keith (University of California Santa Barbara) ;
Castilla-Rubio, Juan Carlos (Spacetime Ventures (Brazil)) ;
Chaw, Shu-Miaw (Academia Sinica. Biodiversity Research Center (Taiwan)) ;
Chen, Lei (Northwestern Polytechnical University. School of Ecology and Environment (China)) ;
Childers, Anna K. (US Department of Agriculture. Beltsville Agricultural Research Center) ;
Coddington, Jonathan A. (Smithsonian Institution. National Museum of Natural History) ;
Conde, Dalia A. (University of Southern Denmark. Department of Biology) ;
Corominas, Montserrat (Universitat de Barcelona. Departament de Genètica, Microbiologia i Estadística) ;
Crandall, Keith A. (George Washington University. Department of Biostatistics & Bioinformatics) ;
Crawford, Andrew J. (Universidad de los Andes. Department of Biological Sciences (Colombia)) ;
Di Palma, Federica (Genome British Columbia (Vancouver)) ;
Durbin, Richard (University of Cambridge. Department of Genetics) ;
Ebenezer, ThankGod E. (Wellcome Genome Campus. European Bioinformatics Institute) ;
Edwards, Scott (Harvard University. Department of Organismic and Evolutionary Biology) ;
Fedrigo, Olivier (The Rockefeller University. Laboratory of the Neurogenetics of Language (USA)) ;
Flicek, Paul (Wellcome Trust Sanger Institute (Regne Unit)) ;
Formenti, Giulio (The Rockefeller University. Vertebrate Genome Lab (USA)) ;
Gibbs, Richard A. (Baylor College of Medicine. Human Genome Sequencing Center) ;
Gilbert, M. Thomas P. (University of Copenhagen. The GLOBE Institute) ;
Goldstein, Melissa M. (George Washington University. Department of Health Policy and Management) ;
Marshall Graves, Jennifer A. (University of Canberra. Institute for Applied Ecology) ;
Greely, Henry (Stanford University. Stanford Law School) ;
Grigoriev, Igor (United States. Department of Energy. Joint Genome Institute) ;
Hackett, Kevin J. (United States. Department of Agriculture. Agricultural Research Service) ;
Hall, Neil (Norwich Research Park. Earlham Institute (UK)) ;
Haussler, David (University of California Santa Cruz. Genome Institute (USA)) ;
Helgen, Kristofer M. (Australian Museum Research Institute) ;
Hogg, Carolyn J. (University of Sydney. School of Life and Environmental Sciences) ;
Isobe, Sachiko (Kazusa DNA Research Institute. Department of Frontier Research and Development) ;
Jakobsen, Kjetill Sigurd (University of Oslo. Department of Biosciences) ;
Janke, Axel (Senckenberg Leibniz Institution for Biodiversity and Earth System Research. LOEWE Centre of Translational Biodiversity Genomics) ;
Jarvis, Erich (The Rockefeller University. Laboratory of the Neurogenetics of Language (USA)) ;
Johnson, Warren E. (Smithsonian Conservation Biology Institute) ;
Jones, Steven J. M. (Canada's Michael Smith Genome Sciences Centre) ;
Karlsson, Elinor K. (University of Massachusetts Medical School. Bioinformatics and Integrative Biology) ;
Kersey, Paul J. (Royal Botanic Gardens Kew) ;
Kim, Jin-Hyoung (Korea Polar Research Institute. Division of Life Sciences) ;
Kress, W. John (Smithsonian Institution. National Museum of Natural History) ;
Kuraku, Shigehiro (National Institute of Genetics. Department of Genomics and Evolutionary Biology) ;
Lawniczak, Mara K. N. (Wellcome Sanger Institute (Cambridge)) ;
Leebens-Mack, James H. (University of Georgia. Department of Plant Biology) ;
Li, Xueyan (Chinese Academy of Sciences. Kunming Institute of Zoology) ;
Lindblad-Toh, Kerstin (Uppsala University. Department of Medical Biochemistry & Microbiology) ;
Liu, Xin (Beijing Genomics Institute-Shenzhen) ;
Lopez, Jose V. (Nova Southeastern University. Department of Biological Sciences) ;
Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont) ;
Mazard, Sofhie (Macquarie University. Bioplatforms Australia) ;
Mazet, Jonna (University of California Davis. One Health Institute) ;
Mazzoni, Camila J. (Berlin Center for Genomics in Biodiversity Research) ;
Myers, Eugene W. (Max Planck Institute of Molecular Cell Biology and Genetics (Germany)) ;
O'Neill, Rachel J. (University of Connecticut. Institute for Systems Genomics) ;
Paez, Sadye (The Rockefeller University. Laboratory of the Neurogenetics of Language (USA)) ;
Park, Hyun (Korea University. Division of Biotechnology) ;
Robinson, Gene (University of Illinois at Urbana−Champaign. Department of Entomology) ;
Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Ryder, Oliver A (University of California San Diego. Department of Evolution, Behavior, and Ecology (USA)) ;
Sabir, Jamal S. M. (King Abdulaziz University. Department of Biological Sciences (Saudi Arabia)) ;
Shaffer, Howard Bradley (University of California, Los Angeles. Department of Ecology and Evolutionary Biology) ;
Shank, Timothy M. (Woods Hole Oceanographic Institution) ;
Sherkow, Jacob S. (University of Illinois at Urbana−Champaign. Department of Entomology) ;
Soltis, Pamela (University of Florida. Florida Museum of Natural History) ;
Tang, Boping (Yancheng Teachers University. School of Wetlands (China)) ;
Tedersoo, Leho (University of Tartu. Center of Mycology and Microbiology) ;
Uliano da Silva, Marcela (Wellcome Sanger Institute (Cambridge)) ;
Wang, Kun (Northwestern Polytechnical University. School of Ecology and Environment (China)) ;
Wei, Xiaofeng (Beijing Genomics Institute-Shenzhen) ;
Wetzer, Regina (University of Southern California, Los Angeles. Biological Sciences) ;
Wilson, Julia L. (Wellcome Sanger Institute (Cambridge)) ;
Xu, Xun (Beijing Genomics Institute-Shenzhen) ;
Yang, Huanming (Beijing Genomics Institute-Shenzhen) ;
Yoder, Anne (Duke University, Durham. Department of Biology) ;
Zhang, Guojie (Beijing Genomics Institute-Shenzhen)
2022 - 10.1073/pnas.2115635118
Proceedings of the National Academy of Sciences of the United States of America, Vol. 119, Num. 4 (2022) , art. e2115635118
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9.
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18 p, 3.6 MB |
The Treasure Vault Can be Opened : Large-Scale Genome Skimming Works Well Using Herbarium and Silica Gel Dried Material
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Alsos, Inger Greve (UiT The Arctic University of Norway. The Arctic University Museum of Norway) ;
Lavergne, Sebastien (LECA. Université Grenoble Alpes. Université Savoie Mont Blanc) ;
Merkel, Marie Kristine Føreid (UiT The Arctic University of Norway. The Arctic University Museum of Norway) ;
Boleda, Martí (LECA. Université Grenoble Alpes. Université Savoie Mont Blanc) ;
Lammers, Youri (UiT The Arctic University of Norway. The Arctic University Museum of Norway) ;
Alberti, Adriana (Université Paris-Saclay) ;
Pouchon, Charles (LECA. Université Grenoble Alpes. Université Savoie Mont Blanc) ;
Denoeud, France (Université Paris-Saclay) ;
Pitelkova, Iva (UiT The Arctic University of Norway. The Arctic University Museum of Norway) ;
Pușcaș, Mihai (Babeș-Bolyai University. Faculty of Biology and Geology (Romania)) ;
Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Hurdu, Bogdan-Iuliu (National Institute of Research and Development for Biological Sciences (Romania)) ;
Thuiller, Wilfried (LECA. Université Grenoble Alpes. Université Savoie Mont Blanc) ;
Zimmermann, Niklaus E. (Swiss Federal Research Institute WSL) ;
Hollingsworth, Peter M. (Royal Botanic Garden Edinburgh) ;
Coissac, Eric (LECA. Université Grenoble Alpes. Université Savoie Mont Blanc)
Genome skimming has the potential for generating large data sets for DNA barcoding and wider biodiversity genomic studies, particularly via the assembly and annotation of full chloroplast (cpDNA) and nuclear ribosomal DNA (nrDNA) sequences. [...]
2020 - 10.3390/plants9040432
Plants, Vol. 9, Num. 14 (April 2020) , art. 432
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10.
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2 p, 214.9 KB |
L'origen de la diversitat de les campanetes
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Sáez, Llorenç (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ;
Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia)
Les campanulàcies són una família de plantes difoses arreu del món. Principalment es troben en àrees muntanyoses, així com en regions de climes freds i àrids de l'hemisferi nord. Bona part de les espècies que en formen part presenten típicament flors d'un color blau violaci amb forma de campana. [...]
Las campanuláceas son una familia de plantas difundidas por cualquier parte del mundo. Principalmente, se encuentran en áreas montañosas, así como en regiones de climas fríos y áridos del hemisferio norte. [...]
2010
UAB divulga, Febrer 2010, p. 1-2
2 documents
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